Directly preceding Tutorials' Day of ISMB 2010
9 July 2010 @ Hynes Convention Center Boston

Registration

Agenda

Location: Room 200

8:00 am - 8:45 am
Registration

8:45 am - 9:30 am
Scientific speed dating and Opening remarks

9:30 am - 10:15 am
Keynote
Predicting protein-protein interaction networks from the genome
Gary Bader, University of Toronto

10:15 am – 10:45 am
Coffee Break

10:45 am - 12:00 am
Session 1: Proteins

  • Modeling protein-peptide interactions using protein fragments: fitting the pieces?
    Peter Vanhee, Vrije Universiteit, Brussels, Belgium
  • Bridging the Gaps: Atomic Simulation of Macromolecular Environment Brings Together Protein Docking, Interaction Kinetics and the Crowding Effects
    Xiaofan Li, Cancer Research UK London Research Institute, London, UK
  • Exploiting physical properties in protein structure alignment
    Shweta Shah, Carnegie Mellon University, Pittsburgh, USA
  • Structure-based kernels for the prediction of catalytic residues and their involvement in inherited disease
    Fuxiao Xin, Indiana University, Bloomington, USA

12:00 pm - 12:30 pm
Research and Industry Partners Session

12:30 pm - 1:30 pm
Lunch Break

1:30 pm - 2:15 pm
Keynote
Thinking Big: How Artificial Intelligence and Molecular Biology can transform each other
Larry Hunter, University of Colorado

2:15 pm - 3:30pm
Session 2: (Epi)Genomics

  • A hidden Markov model for detecting multi-gene chromatin domains
    Jessica Larson, Harvard University, Boston, USA
  • Genome wide association study of non­synonymous Single Nucleotide Polymorphisms for seven common diseases
    Praveen Surendran, University College Dublin, Dublin, Ireland
  • is-rSNP: A novel technique for in silico regulatory SNP detection
    Geoff Macintyre, The University of Melbourne, Victoria, Australia
  • Next Generation Genome Annotation with mGene.ngs
    Jonas Behr, Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany

3:30 pm - 4:00 pm
Coffee Break

4:00 pm - 5:00 pm
Session 3: Bioinformatics of Health and Disease

  • Analysis of the functional properties of the creatine kinase system using a multiscale “sloppy” modeling approach
    Hannes Hettling, VU University, Amsterdam, The Netherlands
  • Designing and implementing chemoinformatic approaches in TDR Targets Database: linking genes to chemical compounds in tropical disease causing pathogens
    María Paula Magariños, Universidad de San Martín, San Martín, Argentina
  • A computational pipeline for diagnostic biomarker discovery in the human pathogen Trypanosoma cruzi
    Santiago Carmona, Universidad Nacional de San Martín, San Martín, Argentina
  • A bioengineering approach for rational vaccine design towards the Ebola Virus
    Sophia Banton, Florida Atlantic University, Boca Raton, USA

5:00 pm - 5:45 pm
Keynote
Genomic Variation and the Inherited Basis of Common Disease
David Altshuler, Broad Institute of MIT and Harvard

5:45 pm - 6:00 pm
Closing Remarks

6:00 pm - 7:30 pm
Poster Session

sfy39587f11